ausgewählte Publikationen Journalartikel Design considerations for representing systems biology information with the Systems Biology Graphical Notation. Journal of Integrative Bioinformatics. 2022 COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms. Molecular Systems Biology. e10387.1-e10387.22. 2021 Visual exploration of large metabolic models. Bioinformatics. 4460-4468. 2021 Specifications of standards in systems and synthetic biology: status and developments in 2020. Journal of Integrative Bioinformatics. 2020 Streamline pair selection for comparative flow field visualization. Visual Computing for Industry, Biomedicine, and Art. 20. 2020 Systems biology graphical notation markup language (SBGNML) version 0.3. Journal of Integrative Bioinformatics. 2020 The Data Visualisation and Immersive Analytics Research Lab at Monash University. Visual Informatics. 41-49. 2020 OntoPlot: A Novel Visualisation for Non-hierarchical Associations in Large Ontologies. IEEE Transactions on Visualization and Computer Graphics. 1-1. 2019 Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0. Journal of Integrative Bioinformatics. 2019 VR system for spatio-temporal visualization of tweet data and support of map exploration. Multimedia Tools and Applications. 32849-32868. 2019 ContextuWall: Multi-site collaboration using display walls. Journal of Visual Languages & Computing. 35-42. 2018 Genome-scale metabolic modeling of responses to polymyxins inPseudomonas aeruginosa. GigaScience. 2018 3D-Stereoscopic Immersive Analytics Projects at Monash University and University of Konstanz. Electronic Imaging. 179-187. 2017 Stereoscopic Space Map – Semi-immersive Configuration of 3D-stereoscopic Tours in Multi-display Environments. Electronic Imaging. 1-9. 2016 Toward Community Standards and Software for Whole-Cell Modeling. IEEE Transactions on Biomedical Engineering. 2007-2014. 2016 Metabolomics, Standards, and Metabolic Modeling for Synthetic Biology in Plants. Frontiers in Bioengineering and Biotechnology. 2015 Systems Biology Graphical Notation: Activity Flow language Level 1 Version 1.2. Journal of Integrative Bioinformatics. 340-381. 2015 Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2. Journal of Integrative Bioinformatics. 281-339. 2015 Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE). Standards in Genomic Sciences. 1285-1301. 2014 Conversion of KEGG metabolic pathways to SBGN maps including automatic layout. BMC Bioinformatics. 250. 2013 Path2Models: large-scale generation of computational models from biochemical pathway maps. BMC Systems Biology. 116. 2013 Translation of SBGN maps: Process Description to Activity Flow. BMC Systems Biology. 115. 2013 Creating interactive, web-based and data-enriched maps with the Systems Biology Graphical Notation. Nature Protocols. 579-593. 2012 MetaCrop 2.0: managing and exploring information about crop plant metabolism. Nucleic Acids Research. D1173-D1177. 2012 OPTIMAS-DW: A comprehensive transcriptomics, metabolomics, ionomics, proteomics and phenomics data resource for maize. BMC Plant Biology. 245. 2012 Software support for SBGN maps: SBGN-ML and LibSBGN. Bioinformatics. 2016-2021. 2012 VANTED v2: a framework for systems biology applications. BMC Systems Biology. 139. 2012 Wiring diagrams in biology: towards the standardized representation of biological information. Trends in Biotechnology. 555-557. 2012 HTPheno: An image analysis pipeline for high-throughput plant phenotyping. BMC Bioinformatics. 148. 2011 Editing, validating and translating of SBGN maps. Bioinformatics. 2340-2341. 2010 Intraspecific hybrids of Arabidopsis thaliana revealed no gross alterations in endopolyploidy, DNA methylation, histone modifications and transcript levels. Theoretical and Applied Genetics. 215-226. 2010 Novel Developments of the MetaCrop Information System for Facilitating Systems Biological Approaches. Journal of Integrative Bioinformatics. 2010 Different Hormonal Regulation of Cellular Differentiation and Function in Nucellar Projection and Endosperm Transfer Cells: A Microdissection-Based Transcriptome Study of Young Barley Grains. Plant Physiology. 1436-1452. 2008 Konferenzpaper Tangible Globes for Data Visualisation in Augmented Reality. CHI Conference on Human Factors in Computing Systems. 2022 Towards a hybrid user interface for the visual exploration of large biomolecular networks using virtual reality. Journal of Integrative Bioinformatics. 2022 Human-Centred Feasibility Restoration. 27th International Conference on Principles and Practice of Constraint Programming (CP 2021). 2021 Quantitative Data Visualisation on Virtual Globes. CHI Conference on Human Factors in Computing Systems. 2021 Maps Around Me. Proceedings of the ACM on Human-Computer Interaction. 1-20. 2020 Augmented Reality Map Navigation with Freehand Gestures. 2019 IEEE Conference on Virtual Reality and 3D User Interfaces (VR). 2019 Viewpoint Selection for Shape Comparison of Mode Water Regions in a VR Space. 2019 23rd International Conference Information Visualisation (IV). 2019 Process Plant Layout Optimization: Equipment Allocation. Lecture Notes in Computer Science. 473-489. 2018 Spatio-Temporal Visualization of Tweet Data around Tokyo Disneyland Using VR. Proceedings of the 23rd International Conference on Intelligent User Interfaces Companion. 1-2. 2018 VR System for Spatio-Temporal Visualization of Tweet Data. 2018 22nd International Conference Information Visualisation (IV). 2018 An Optimization Model for 3D Pipe Routing with Flexibility Constraints. Lecture Notes in Computer Science. 321-337. 2017 Immersive Isosurface Visualisation for Engineering Datasets. 2017 International Symposium on Big Data Visual Analytics (BDVA). 2017 Streamline Selection for Comparative Visualization of 3D Fluid Simulation Result. 2017 21st International Conference Information Visualisation (IV). 2017 ContextuWall: Peer Collaboration Using (Large) Displays. 2016 Big Data Visual Analytics (BDVA). 2016 Immersive Analytics. 2015 Big Data Visual Analytics (BDVA). 2015 FULL-LENGTH HPLC SIGNAL CLUSTERING AND BIOMARKER IDENTIFICATION IN TOMATO PLANTS. Proceedings of the 7th International FLINS Conference. 549-556. 2006 Sammelbandbeitrag Immersive Analytics Applications in Life and Health Sciences. Immersive Analytics. 289-330. 2018 Information Visualization for Biological Data. Methods in Molecular Biology. 403-415. 2017